Running any business requires accounting and it’s especially essential when you have a Shopify store.  Choosing the best accounting software for a Shopify store is not so easy but it’s a decision you need to spend time on.  Because if you start selling in volume you won’t have time to sit there manually doing your accounts.  You’ll want your Shopify store synchronised with a decent accounting package.

While you can do all of your accounting on your own, it’s often quite time consuming and you can easily get lost in it even if you have accounting experience. Turn your focus back to your store by using accounting or bookkeeping software, with the best accounting software for Shopify to choose from.  Your accountant will thank you for it.

Which is the Best Accounting Software for Shopify Stores?

Ultimately automating your accounting processes just minimises the headaches for you, and although everyone’s needs are pretty much the same, the options available can vary depending on the country. Having dedicated Shopify accounting software will automate all your accounting tasks, and give you a clear overview of what’s going on, as well as valuable insights that can help your business grow.

That being said, the 2 best accounting software for Shopify options that work across international stores and have the right integration are:

xero logo Shopify

Xero Accounting Software

Xero is a powerful online accounting software specifically aimed towards larger merchants. Their ecommerce solutions have everything your Shopify store needs to get an instant overview of your business operations and finances thanks to their intuitive dashboard. It allows you to manage all your finances through their accounting app, and sync with other apps that you use.

Shopify integration with accounting software is important and thanks to the Xero app it makes it an excellent choice because of the flawless experience to users. Because of Xero’s features, it’s a more powerful platform than Quickbooks and better suited to larger merchants, (but, of course, you are free to try it out even if you run a small business.)

Install the Xero app for Shopify here.

quickbooks for Shopify

Quickbooks Accounting Software

Quickbooks is another great Shopify accounting software solution that is aimed towards smaller merchants and self-employed individuals. Thanks to its intuitive interface, you can keep everything organized easily, and even share the data with your accountant when needed.

Thanks to their numerous features, like income/expenses, invoice/payments, time tracking and employee management, inventory, reporting, sales, tax deductions and more, you can easily have a complete overview of everything that is going on with your business.

Quickbooks also has seamless Shopify integration with accounting software thanks to their Quickbooks app, which makes it a perfect match for freelancers and small business alike who are more likely to want easy access on the go.

Install the Quickbooks app for Shopify here.

shopify apps for accounts

Which Shopify Accounting Integration Should I Choose?

When choosing your Shopify accounting software, you need to think about what type of business you are running and ask yourself some basic questions to make it easier to decide:

Do you do everything on your own, or do you have employees too?
How big is your company?
Are you a small business, or have you been around for a while and are among the bigger players in your niche?

This will help you choose the best accounting software for Shopify? Both Quickbooks and Xero offer free trials, so you can try the premium options to see which is suited to your store. Try Xero if you already have an established store that is a bit bigger, as this option has more powerful features that can complement the bigger load. As a freelancer or startup however, give Quickbooks a try for a personalised experience that is a bit more user friendly if you’re just starting out.

How Do I Integrate my Accounting Software With Shopify?

Once you’ve decided on the best accounting software for Shopify based on your store and needs, you should sign up for the software free trial. Once you have signed up, you’ll need to install the relevant app from the Shopify App store and connect the two. The Shopify integration with accounting software then has a step by step process to follow on your device.

Do I Need a Shopify developer to Integrate My Accounting Software With Shopify?

This depends solely on you. If your store’s Shopify integration with accounting software is giving you any trouble and aren’t sure on how to fix it, it’s best to contact a Shopify developer. We are happy to give you a hand setting up and integrating your accounting software with your Shopify store so feel free to contact us so we can walk you through it.

Joe Dempsey

Joe Dempsey

Joe Dempsey is a Shopify Expert. With over 8 years of experience in eCommerce & Shopify he leads one of the most experienced Shopify Expert teams in the world. Founder of Liquify, he tends to work with large brands and Shopify Plus merchants who want to scale aggressively. He is a well known Shopify SEO expert & one of the most experienced Shopify developers in the world.